Medical Subject Heading: Infections

Respiratory Syncytial Virus (RSV), Procedures

px_rsv

Description: A binary variable indicating that a patient received any procedure intended to treat Respiratory syncytial Virus (RsV).

Definition: Occurrence of 1 or more codes in the “Respiratory Syncytial Virus (RSV), Procedures" concept set AND occurrence of 1 or more codes in the PEDSnet CDM visit_concept_id field indicating an in-person visit.

Diagnostic or Therapeutic Procedures2021-11Infections

SARS-CoV-2, Serology Laboratory Tests

labs_ser-sarscov2

Description: A binary variable indicating that a patient received a serology laboratory test result for SARS-CoV-2.

Definition: Occurrence of 1 or more codes in the “SARS-CoV-2, Serology Laboratory Tests" concept set AND occurrence of 1 or more codes in the PEDSnet CDM visit_concept_id field indicating an in-person visit.

Clinical Laboratory Techniques2021-11Infections

Sepsis, Diagnosed

dx_sepsis

Description: A binary variable indicating that a patient received a diagnosis of sepsis.

Definition: Occurrence of 1 or more codes in the “Sepsis" concept set AND occurrence of 1 or more codes in the PEDSnet CDM visit_concept_id field indicating an in-person visit. Problem list diagnoses are excluded.

Conditions2023-04Infections

Post-Acute Sequelae of SARS-CoV2, Diagnosed

dx_pasc

Description: A binary variable indicating that a patient received a diagnosis of Post-acute sequelae of SARS-CoV2.

Definition: Occurrence of 1 or more codes in the “Post-Acute Sequelae of SARS-CoV2" concept set AND occurrence of 1 or more codes in the PEDSnet CDM visit_concept_id field indicating an in-person visit. Problem list diagnoses are excluded.

Conditions2022-05InfectionsRespiratory Tract Diseases

Pneumonia, Diagnosed

dx_pneumonia

Description: A binary variable indicating that a patient received a diagnosis of Pneumonia.

Definition: Occurrence of 1 or more codes in the “Pneumonia" concept set AND occurrence of 1 or more codes in the PEDSnet CDM visit_concept_id field indicating an in-person visit. Problem list diagnoses are excluded.

Conditions2021-11InfectionsRespiratory Tract Diseases

Paxlovid, Drug Exposure

rx_paxlovid

Description: A binary variable indicating that a patient had a prescribed, dispensed, or administered exposure to Paxlovid.

Definition: Occurrence of 1 or more codes in the “Paxlovid" concept set AND occurrence of 1 or more codes in the PEDSnet CDM visit_concept_id field indicating an in-person visit.

Medications2022-10Infections

Non-Respiratory Sequelae of COVID-19, Diagnosed

dx_covid19-nonresp

Description: A binary variable indicating that a patient received a diagnosis of Non-Respiratory sequelae of COVID-19.

Definition: Occurrence of 1 or more codes in the “Non-Respiratory Sequelae of COVID-19" concept set AND occurrence of 1 or more codes in the PEDSnet CDM visit_concept_id field indicating an in-person visit. Problem list diagnoses are excluded.

Conditions2021-11InfectionsRespiratory Tract Diseases

Nasal Congestion, Diagnosed

dx_nasalcon

Description: A binary variable indicating that a patient received a diagnosis of Nasal Congestion.

Definition: Occurrence of 1 or more codes in the “Nasal Congestion" concept set AND occurrence of 1 or more codes in the PEDSnet CDM visit_concept_id field indicating an in-person visit. Problem list diagnoses are excluded.

Conditions2021-11InfectionsRespiratory Tract Diseases

Lymphocyte Count, Measurement

labs_lymph

Description: A binary variable indicating that a patient received a laboratory measurement for lymphocyte count.

Definition: Occurrence of 1 or more codes in the “Lymphocyte Count, Measurement" concept set AND occurrence of 1 or more codes in the PEDSnet CDM visit_concept_id field indicating an in-person visit.

Clinical Laboratory Techniques2022-02Immune System DiseasesInfections

Intravenous Immunoglobulin (IVIG), Drug Exposure

rx_ivig

Description: A binary variable indicating that a patient had a prescribed, dispensed, or administered exposure to Intravenous Immunoglobulin (IVIG).

Definition: Occurrence of 1 or more codes in the “Intravenous Immunoglobulin (IVIG)" concept set AND occurrence of 1 or more codes in the PEDSnet CDM visit_concept_id field indicating an in-person visit.

Medications2023-04Immune System DiseasesImmunosuppressantsInfections