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Affordances for Retrieval of General Observational Stuff


argos

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Data Model

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PEDSnet

About

The argos package subsumes the standard framework system in PEDSnet. Use of argos is the PEDSnet standard of practice for interacting with databases using the OMOP Common Data Model or PCORnet® Common Data Model. It collects affordances and recommended practices developed by PEDSnet in its conduct of clinical research.

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devtools::install_github('PEDSnet/argos')

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Description

Using databases following the OMOP Common Data Model or similar CDMs typically involves a fair amount of common and repeated tasks. This package collects conventions, best practices, and affordances developed at PEDSnet to make interacting with this type of data easier and more reproducible.

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Related Resources

argos & Trino Demonstration
Created:2026-03-05
An office hours session dedicated to demoing the functionality of the argos R package and how to utilize it with the Trino database backend.
PEDSnet Data Analytics: argos Demonstration
Created:2026-08-14
This demonstration is an overview of how to use argos, the R package version of the PEDSnet standard framework, to connect to the Trino database backend and conduct analytics in R. This presentation was given at the PEDSnet Data Analytics meeting in August 2026.

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Creative Commons license

Except where otherwised noted, this item's license is described as an Artistic License Version 2.0.

This license applies to the metadata and documentation of this digital package. The source code and software components may be governed by different licensing terms. Please refer to the GitHub repository link for specific software licensing information.