Fatigue, Diagnosed
| dc.contributor.advisor | Utidjian, Levon |
| dc.contributor.author | Utidjian, Levon |
| dc.contributor.other | PEDSnet Data Coordinating Center |
| dc.date.accessioned | 2024-06-10T19:03:24Z |
| dc.date.available | 2024-06-10T19:03:24Z |
| dc.date.created | 2023-10-01 |
| dc.date.updated | 2023-10 |
| dc.description | This condition concept set includes all fatigue-related conditions. It was generated by taking all descendants of the SNOMED code 84229001 for Fatigue, related ICD9CM/10/10CM codes, and searching all mentions of 'fatigue' in the concept_name. ICD codes are included with and without decimal points, indicated by cc_decimal_removal. This concept set is limited to ICD9, ICD10, ICD10CM and SNOMED diagnosis codes. Diagnoses related to pregnancy/gestation were excluded. |
| dc.description.abstract | This concept set is inteded to identify patients with a diagnosis of fatigue. |
| dc.identifier.uri | https://hdl.handle.net/20.500.14642/542 |
| dc.identifier.uri | https://doi.org/10.24373/pdsp-172 |
| dc.provenance | The concept set was developed for the study "Preserving Kidney Function in Children with Chronic Kidney Disease" (PRESERVE) for diagnoses and symptoms fatigue. |
| dc.publisher | PEDSnet |
| dc.relation.uri | https://atlassian.chop.edu/bitbucket/projects/PR/repos/preserve_codesets/browse/sql_queries/dx_fatigue.sql |
| dc.rights | a CC-BY Attribution 4.0 License. |
| dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ |
| dc.subject.mesh | Fatigue |
| dc.subject.mesh | Signs and Symptoms |
| dc.subject.mesh | Pathological Conditions, Signs and Symptoms |
| dc.subject.other | ICD-9-CM |
| dc.subject.other | ICD-10 |
| dc.subject.other | ICD-10-CM |
| dc.subject.other | SNOMED |
| dc.title | Fatigue, Diagnosed |
| dspace.entity.type | ConceptSet |
| local.admin.note | https://atlassian.chop.edu/bitbucket/projects/PR/repos/preserve_codesets/browse/sql_queries/dx_fatigue.sql |
| local.code.package | select * from concept where concept_code = '84229001' and vocabulary_id = 'SNOMED'; --"fatigue" clinical finding --SM descendants select distinct concept_id, concept_code, concept_name, vocabulary_id, case when vocabulary_id = 'ICD9CM' then '09' when vocabulary_id in ('ICD10', 'ICD10CM') then '10' when vocabulary_id = 'SNOMED' then 'SM' end pcornet_vocabulary_id from concept where concept_id in ( select descendant_concept_id from concept_ancestor where ancestor_concept_id in (4223659) -- fatigue and vocabulary_id in ('ICD9CM', 'ICD10', 'ICD10CM', 'SNOMED') ) and lower(concept_name) not like '%pregnancy%' and lower(concept_name) not like '%gestational%' union --mapping of SM codes to ICD select distinct concept_id, concept_code, concept_name, vocabulary_id, case when vocabulary_id = 'ICD9CM' then '09' when vocabulary_id in ('ICD10', 'ICD10CM') then '10' when vocabulary_id = 'SNOMED' then 'SM' end pcornet_vocabulary_id from concept where concept_id in ( select concept_id_1 from concept_relationship where relationship_id = 'Maps to' and concept_id_2 in ( select descendant_concept_id from concept_ancestor where ancestor_concept_id in (4223659) )) and vocabulary_id in ('ICD9CM', 'ICD10', 'ICD10CM', 'SNOMED') union --string matching (in SM, catches non-standard codes in case other sites are using) select distinct concept_id, concept_code, concept_name, vocabulary_id, case when vocabulary_id = 'ICD9CM' then '09' when vocabulary_id in ('ICD10', 'ICD10CM') then '10' when vocabulary_id = 'SNOMED' then 'SM' end pcornet_vocabulary_id from concept where ((lower(concept_name) like '%fatigue%') and lower(concept_name) not like '%fracture%' and lower(concept_name) not like '%no fatigue%' and lower(concept_name) not like '%no history of fatigue%' and lower(concept_name) not like '%no h/o fatigue%' and lower(concept_name) not like '%fh:%' and lower(concept_name) not like '%family history%' and lower(concept_name) not like '%pregnancy%' and lower(concept_name) not like '%gestational%' and lower(concept_name) not like '%management%' and lower(concept_name) not like '%score%' and lower(concept_name) not like '%level of fatigue%' and lower(concept_name) not like '%referral%' and domain_id not in ('Drug', 'Procedure', 'Measurement', 'Type Concept', 'Metadata', 'Device') --and concept_class_id not in ('Body Structure','Morph Abnormality') and vocabulary_id in ('ICD9CM', 'ICD10', 'ICD10CM', 'SNOMED') ) order by vocabulary_id, concept_code |
| local.quality.status | Study-Specific |
| local.subject.DataModel | PEDSnet Data Model |
| local.subject.DataModel | PCORnet Data Model |
| local.subject.EvalType | Clinician Reviewed |
| local.variable.name | dx_fatigue |
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