Expected Concepts Present
| dc.contributor.author | Wieand, Kaleigh |
| dc.contributor.author | Dickinson, Kimberley |
| dc.contributor.other | PEDSnet Data Coordinating Center |
| dc.date.accessioned | 2025-05-28T17:15:42Z |
| dc.date.created | 2024 |
| dc.description.abstract | A network data quality check which computes the proportion of patients with evidence of a specified concept. The proportion is computed using the number of patients in the cohort with the concept of interest as the numerator, and all patients meeting the specified cohort definition as the denominator.<br> <br> Results of this check for the current data cycle can be explored on the <a href="https://pedsnet.org/metadata/entities/documentation/9a3dcf2c-b84e-4c9c-9e09-074804956d0f">PEDSnet Data Quality Dashboard</a>. Data quality results for previous data cycles have been archived in the <a href="https://pedsnet.org/metadata/collections/8fd5bbf7-7f88-4d4e-84b0-a620a5460e91">Expected Concepts Present Network Results collection</a>. |
| dc.identifier.uri | https://hdl.handle.net/20.500.14642/1046 |
| dc.identifier.uri | https://doi.org/10.24373/pdsp-479 |
| dc.publisher | PEDSnet |
| dc.relation.uri | https://github.com/PEDSnet/ndq/blob/main/R/expected_concepts_present.R |
| dc.rights | a CC-BY Attribution 4.0 license. |
| dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ |
| dc.title | Expected Concepts Present |
| dspace.entity.type | DQCheck |
| local.description.raw | This check produces a raw data output containing 9 columns of data: <br> |Column |Data Type|Definition | |----------------|---------|--------------------------------------------------------------------------------------------| |`total_pt_ct`|numeric|the total number of patients in the cohort| |`concept_pt_ct`|numeric|the number of patients in the cohort with the concept of interest| |`concept_group`|numeric|the concept being evaluated| |`prop_with_concept`|numeric|the proportion of patients with the concept of interest| |`site` |character|the name of the site being targeted | |`database_version` |character |the database version from which the counts originated | |`check_type` |character |a short string identifier for the module | |`check_name` |character |a short string identifier for the check | |`cohort_denom`|character|a description of the cohort used to evaluate the concept| {.dqcheck-table} <br> |
| local.description.viz | **NOTE: The visualizations are NOT part of the packaged code. This description applies to the visualizations available on the <a href="https://pedsnet.org/metadata/entities/documentation/9a3dcf2c-b84e-4c9c-9e09-074804956d0f">PEDSnet Data Quality Dashboard</a>.** <br><br> These results are visualized as a bar graph with one facet per selected concept, proportion of patients in the cohort with the concept along the X axis, and site along the Y axis. |
| local.dqcheck.category | Information Representation |
| local.dqcheck.clinicalprobe | Expected Clinical Event Representation |
| local.dqcheck.clinicalprobe | Clinical Data Distributions |
| local.dqcheck.probe | Information Density |
| local.dqcheck.requirement | ecp_tbl |
| local.dqcheck.requirement | omop_or_pcornet |
| local.dqcheck.requirement | check_string |
| local.dqcheck.viz | Bar Graph |
| relation.isCodeOfDQCheck | 3518c7c7-0f20-491d-bd3d-a2841b66ca2f |
| relation.isCodeOfDQCheck.latestForDiscovery | 3518c7c7-0f20-491d-bd3d-a2841b66ca2f |
| relation.isDQResultOfDQCheck | 2419618f-9b4a-4a1f-bf55-2fdb461df383 |
| relation.isDQResultOfDQCheck.latestForDiscovery | 2419618f-9b4a-4a1f-bf55-2fdb461df383 |
| relation.isDocumentationOfDQCheck | 9a3dcf2c-b84e-4c9c-9e09-074804956d0f |
| relation.isDocumentationOfDQCheck.latestForDiscovery | 9a3dcf2c-b84e-4c9c-9e09-074804956d0f |
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