Patient-Facts: Single Site, Exploratory, Cross-Sectional Analysis
| dc.contributor | Patient-Centered Outcomes Research Institute |
| dc.contributor.author | PEDSnet Data Coordinating Center |
| dc.contributor.other | PEDSnet Data Coordinating Center |
| dc.date.accessioned | 2024-07-30T19:37:10Z |
| dc.date.created | 2024-06-05 |
| dc.description.abstract | This check assesses how much clinical data is available for patients. It provides a screen shot of clinical data for a single site. |
| dc.identifier.uri | https://hdl.handle.net/20.500.14642/741 |
| dc.identifier.uri | https://doi.org/10.24373/pdsp-417 |
| dc.publisher | PEDSnet |
| dc.relation.uri | https://github.com/ssdqa/patientfacts |
| dc.rights | a CC-BY Attribution 4.0 License. |
| dc.rights.uri | http://creativecommons.org/licenses/by/4.0 |
| dc.subject | Single Site Analysis |
| dc.subject | Exploratory Analysis |
| dc.subject | Cross-Sectional Analysis |
| dc.subject | Person-Level Analysis |
| dc.title | Patient-Facts: Single Site, Exploratory, Cross-Sectional Analysis |
| dspace.entity.type | DQCheck |
| local.code.package | # install.packages("devtools") devtools::install_github('ssdqa/https://github.com/ssdqa/patientfacts') |
| local.description.raw | The raw data output of this check produces ten columns of data: <br> | Column | Data Type | Definition | |-----------------------|-----------|----------------------------------------------------------------------------------------------------------------------------------| |`study` | character | a user provided string label for the study | |`site` | character | the name of the site being targeted OR "combined" if multiple sites were provided | |`visit_type` | character | string indicating the visit type | |`domain` | character | string indicating the domain | |`median_all_with0s` | numeric | overall median facts per year of follow up across the cohort, including patients that do not have evidence of the domain | |`median_all_without0s` | numeric | overall median facts per year of follow up across the cohort, excluding patients that do not have evidence of the domain | |`n_tot` | numeric | total number of patients in the cohort | |`n_w_fact` | numeric | number of patients in the cohort with a fact in the domain of interest | |`median_site_with0s` | numeric |`site`-specific median facts per year of follow up across the cohort, including patients that do not have evidence of the domain | |`median_site_without0s` | numeric |`site`-specific median facts per year of follow up across the cohort, excluding patients that do not have evidence of the domain | {.dqcheck-table} |
| local.description.viz | This check outputs a faceted bar graph that summarizes the median number of facts per patient. The domain is shown along the y-axis with the median fact count along the x-axis. The user can customize the facets used such as visit_type, site, age category, etc. |
| local.dqcheck.category | Completeness |
| local.dqcheck.clinicalprobe | Clinical Follow-Up |
| local.dqcheck.clinicalprobe | Utilization Patterns |
| local.dqcheck.measurement | Frequency Distribution |
| local.dqcheck.probe | Information Density |
| local.dqcheck.probe | Missing Expected Data |
| local.dqcheck.requirement | cohort |
| local.dqcheck.requirement | study_name |
| local.dqcheck.requirement | patient_level_tbl |
| local.dqcheck.requirement | visit_types |
| local.dqcheck.requirement | omop_or_pcornet |
| local.dqcheck.requirement | multi_or_single_site |
| local.dqcheck.requirement | time |
| local.dqcheck.requirement | time_span |
| local.dqcheck.requirement | time_period |
| local.dqcheck.requirement | p_value |
| local.dqcheck.requirement | age_groups |
| local.dqcheck.requirement | anomaly_or_exploratory |
| local.dqcheck.requirement | domain_tbl |
| local.dqcheck.requirement | visit_type_table |
| local.dqcheck.type | Cohort Fitness |
| local.dqcheck.viz | Bar Graph |
| relation.isCodeOfDQCheck | 929c8dfc-2c8b-4e62-8e1d-0fa06c542832 |
| relation.isCodeOfDQCheck.latestForDiscovery | 929c8dfc-2c8b-4e62-8e1d-0fa06c542832 |
| relation.isDQResultOfDQCheck | fda0183a-2513-4f31-9c5b-8b1d5e29c943 |
| relation.isDQResultOfDQCheck | 50526b39-6e23-47b8-b600-da0ce348ba27 |
| relation.isDQResultOfDQCheck.latestForDiscovery | fda0183a-2513-4f31-9c5b-8b1d5e29c943 |
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