Best Mapped Concepts
| dc.contributor.author | Wieand, Kaleigh |
| dc.contributor.author | Dickinson, Kimberley |
| dc.contributor.other | PEDSnet Data Coordinating Center |
| dc.date.accessioned | 2025-05-28T17:15:37Z |
| dc.date.created | 2024 |
| dc.description.abstract | A network data quality check which computes the proportion of concepts mapped to an ideal set of values. The output shows the proportion of concepts mapped to each level of a hierarchy (e.g. RxNorm for drugs) or categories of a categorical variable. The best versus not-best designations are customizable by the user.<br> <br> Results of this check for the current data cycle can be explored on the <a href="https://pedsnet.org/metadata/entities/documentation/9a3dcf2c-b84e-4c9c-9e09-074804956d0f">PEDSnet Data Quality Dashboard</a>. Data quality results for previous data cycles have been archived in the <a href="https://pedsnet.org/metadata/collections/12a64dca-a525-4c01-af93-b258662f5b49">Best Mapped Concepts Network Results collection</a>. |
| dc.identifier.uri | https://hdl.handle.net/20.500.14642/1042 |
| dc.identifier.uri | https://doi.org/10.24373/pdsp-486 |
| dc.publisher | PEDSnet |
| dc.relation.uri | https://github.com/PEDSnet/ndq/blob/main/R/best_mapped_concepts.R |
| dc.rights | a CC-BY Attribution 4.0 license. |
| dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ |
| dc.title | Best Mapped Concepts |
| dspace.entity.type | DQCheck |
| local.description.raw | This check produces a raw data output containing 12 columns of data: <br> |Column |Data Type|Definition | |----------------|---------|--------------------------------------------------------------------------------------------| |`concept`|character|the names of all the concepts present in the data for the check| |`concept_rows`|numeric|the number of rows represented by the concept| |`concept_pts`|numeric|the number of patients represented by the concept| |`total_rows`|numeric|the total number of rows in the domain of interest| |`total_pts`|numeric|the total number of patients in the domain of interest| |`row_proportions`|numeric|the proportion of rows represented by the concept| |`person_proportions`|numeric|the proportion of patients represented by the concept| |`site` |character|the name of the site being targeted | |`database_version` |character |the database version from which the counts originated | |`check_type` |character |a short string identifier for the module | |`check_name` |character |a short string identifier for the check | |`check_desc`|character|the fact type being evaluated| {.dqcheck-table} <br> |
| local.description.viz | **NOTE: The visualizations are NOT part of the packaged code. This description applies to the visualizations available on the <a href="https://pedsnet.org/metadata/entities/documentation/9a3dcf2c-b84e-4c9c-9e09-074804956d0f">PEDSnet Data Quality Dashboard</a>.** <br><br> The results are visualized as a bar graph with the proportion of concepts meeting the "best" definition shown along the X axis with site on the Y axis, facetted by the check of interest. Tables are also included to provide the definitions of best and not best concepts. |
| local.dqcheck.category | Information Representation |
| local.dqcheck.clinicalprobe | Expected Clinical Event Representation |
| local.dqcheck.clinicalprobe | Utilization Patterns |
| local.dqcheck.probe | Data Representation Errors |
| local.dqcheck.requirement | bmc_tbl |
| local.dqcheck.requirement | omop_or_pcornet |
| local.dqcheck.requirement | check_string |
| local.dqcheck.requirement | concept_tbl |
| local.dqcheck.viz | Bar Graph |
| relation.isCodeOfDQCheck | 3518c7c7-0f20-491d-bd3d-a2841b66ca2f |
| relation.isCodeOfDQCheck.latestForDiscovery | 3518c7c7-0f20-491d-bd3d-a2841b66ca2f |
| relation.isDQResultOfDQCheck | 912c429a-a00a-428b-a2b7-63e074ec739e |
| relation.isDQResultOfDQCheck.latestForDiscovery | 912c429a-a00a-428b-a2b7-63e074ec739e |
| relation.isDocumentationOfDQCheck | 9a3dcf2c-b84e-4c9c-9e09-074804956d0f |
| relation.isDocumentationOfDQCheck.latestForDiscovery | 9a3dcf2c-b84e-4c9c-9e09-074804956d0f |
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