Paxlovid, Drug Exposure


dc.contributor.advisorBailey, Charles
dc.contributor.advisorBrill, Seuli
dc.contributor.authorHirabayashi, Kathryn
dc.contributor.otherPEDSnet Data Coordinating Center
dc.date.accessioned2024-06-10T19:03:16Z
dc.date.available2024-06-10T19:03:16Z
dc.date.created2022-10-10
dc.descriptionOne of several codesets in the PEDSnet `observation_derivation_recover`(ODR) workflow to extract COVID-19 patients from the [PEDSnet CDM](https://hdl.handle.net/20.500.14642/749.12) `observation` table. This concept set was used to identify pediatric patients under 18 who were prescribed Paxlovid. The concept set was developed by identifying RxNorm codes at the SCDF/SCDG level and descendants indicating Paxlovid, then string searching for the terms 'paxlovid', 'ritonavir', and 'nirmatrelvir' in ‘concept_name’. Codes were identified in the ‘code_type’ column as 'Paxlovid' (indicating nirmatrelvir/ritonavir), 'nirmatrelvir' (indicating nirmatrelvir alone) and 'ritonavir' (indicating ritonavir alone). Please note, this concept set should not be used without appropriate accompanying logic to identify Paxlovid; the concept set contains individual ingredients that comprise the combination. Ritonavir and nirmatrelvir exposure must occur together on the same date to indicate a combination drug prescription. The attached file, FIND_PAXLOVID_FUNCITON.R, provides logic showing how the concept set can be used.
dc.description.abstractThe concept set was intended to identify all patients with a drug_exposure record indicating a Paxlovid exposure (nirmatrelvir/ritonavir).
dc.identifier.urihttps://hdl.handle.net/20.500.14642/458
dc.identifier.urihttps://doi.org/10.24373/pdsp-320
dc.provenanceThis concept set was originally developed to extract COVID patients out of the PEDSnet CDM observation table for the the Researching COVID to Enhance Recovery (RECOVER) Post-Acute Sequelae of SARS-CoV-2 (PASC) Electronic Health Record (EHR) Cohort Study. RECOVER was a was a long-term NIH-funded project focused on analyzing the COVID-19 outbreak, especially the long term health impacts of the pandemic. Thid codeset has also been used in a RECOVER Y1, Q3 query and used to define a cohort in the "COVID and Diabetes Assessment Study (CODA)". These concepts were later reviewed and refined for a brief report on pediatric nirmatrelvir and ritonavir prescribing patterns, "Pediatric Nirmatrelvir/Ritonavir Prescribing Patterns During the COVID-19 Pandemic" (Bose-Brill et. al., 2022).
dc.publisherPEDSnet
dc.relation.isreferencedbyBose-Brill S, Hirabayashi K, Pajor NM, Rao S, Mejias A, Jhaveri R, Forrest CB, et al. 2022. "Pediatric Nirmatrelvir/Ritonavir Prescribing Patterns During the COVID-19 Pandemic". _medRxiv_ [Preprint]. 2022 Dec 26:2022.12.23.22283868. <br>DOI: [10.1101/2022.12.23.22283868](https://doi.org/10.1101/2022.12.23.22283868) <br>Update in: Hosp Pediatr. 2024 Aug 1;14(8):e341-e348. <br> #### [View on PEDSpace](https://pedsnet.org/metadata/entities/publication/182ed66e-65c4-40c7-b914-d1f8c580abb3)
dc.relation.urihttps://atlassian.chop.edu/bitbucket/projects/COV/repos/paxlovid_brief/browse
dc.rightsa CC-BY Attribution 4.0 License.
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.subject.meshRitonavir
dc.subject.meshProtease Inhibitor
dc.subject.meshCytochrome P450 3A Inhibitor
dc.subject.meshAntimicrobial
dc.subject.meshEnzyme Inhibitor
dc.subject.otherNDC
dc.subject.otherRxNorm
dc.subject.otherRxNorm Extension
dc.titlePaxlovid, Drug Exposure
dspace.entity.typeConceptSet
local.quality.statusResearch-Ready
local.subject.DataModelPEDSnet Data Model
local.subject.EvalTypeClinician Reviewed
local.subject.MedTermCharSemantic Clinical Drug Form
local.subject.MedTermCharBrand Pack Name
local.subject.MedTermCharIngredient
local.variable.namerx_paxlovid
relation.isCodeOfConceptSet167e9007-d019-411a-bdc6-b4b7bfce42ca
relation.isCodeOfConceptSet.latestForDiscovery167e9007-d019-411a-bdc6-b4b7bfce42ca
relation.isPublicationOfConceptSet182ed66e-65c4-40c7-b914-d1f8c580abb3
relation.isPublicationOfConceptSet.latestForDiscovery182ed66e-65c4-40c7-b914-d1f8c580abb3
relation.isStudyOfConceptSet4932bc8c-1f72-44ad-aeeb-b7922e38fad3
relation.isStudyOfConceptSet88750976-449c-43d9-8da9-e57cdd0b086c
relation.isStudyOfConceptSet.latestForDiscovery4932bc8c-1f72-44ad-aeeb-b7922e38fad3

Files

Original bundle

Now showing 1 - 2 of 2
Loading...
Thumbnail Image
Name:
rx_2022_10_Paxlovid_V1.csv
Size:
6.96 KB
Format:
Comma-Separated Values
Loading...
Thumbnail Image
Name:
FIND_PAXLOVID_FUNCTION.R
Size:
4.69 KB
Format:
Unknown data format