Patient-Facts: Multi-Site, Exploratory, Cross-Sectional Analysis
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PEDSnet
Abstract
This check assesses how much clinical data is available for patients. It provides a screen shot of clinical data for a multiple sites.
Data Requirements
Probe
Clinical Assessment
Access Package
# install.packages("devtools")
devtools::install_github('ssdqa/https://github.com/ssdqa/patientfacts')Visualization Output
This check outputs a dot plot showing the median number of facts per patient for each site (domain along the y-axis with the median fact count along the x-axis). Each dot indicates a site value, while the star icon represents the overall median. Hovering over the graph provides values for each data point including the site name and the total number of observed patients with a fact.
Raw Output
The raw data output of this check produces ten columns of data:
| Column | Data Type | Definition |
|---|---|---|
study |
character | a user provided string label for the study |
site |
character | the name of the site being targeted |
visit_type |
character | string indicating the visit type |
domain |
character | string indicating the domain |
median_all_with0s |
numeric | overall median facts per year of follow up across the cohort, including patients that do not have evidence of the domain |
median_all_without0s |
numeric | overall median facts per year of follow up across the cohort, excluding patients that do not have evidence of the domain |
n_tot |
numeric | total number of patients in the cohort |
n_w_fact |
numeric | number of patients in the cohort with a fact in the domain of interest |
median_site_with0s |
numeric | site-specific median facts per year of follow up across the cohort, including patients that do not have evidence of the domain |
median_site_without0s |
numeric | site-specific median facts per year of follow up across the cohort, excluding patients that do not have evidence of the domain |
Affiliation(s)
Funder(s)
This research was made possible through the generous support of Patient-Centered Outcomes Research Institute. The statements presented in this work are solely the responsibility of the author(s) and do not necessarily represent the views of PCORI, its Board of Governors, or its Methodology Committee.
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Except where otherwised noted, this item's license is described as a CC-BY Attribution 4.0 License.
Cite this Data Quality Check
PEDSnet Data Coordinating Center. (2024, June). Patient-Facts: Multi-Site, Exploratory, Cross-Sectional Analysis. [D Q Check]. PEDSpace Knowledge Bank. https://doi.org/10.24373/pdsp-415