Patient-Facts: Multi-Site, Exploratory, Cross-Sectional Analysis
| dc.contributor | Patient-Centered Outcomes Research Institute |
| dc.contributor.author | PEDSnet Data Coordinating Center |
| dc.contributor.other | PEDSnet Data Coordinating Center |
| dc.date.accessioned | 2024-07-30T19:37:11Z |
| dc.date.created | 2024-06-05 |
| dc.description.abstract | This check assesses how much clinical data is available for patients. It provides a screen shot of clinical data for a multiple sites. |
| dc.identifier.uri | https://hdl.handle.net/20.500.14642/745 |
| dc.identifier.uri | https://doi.org/10.24373/pdsp-415 |
| dc.publisher | PEDSnet |
| dc.relation.uri | https://github.com/ssdqa/patientfacts |
| dc.rights | a CC-BY Attribution 4.0 License. |
| dc.rights.uri | http://creativecommons.org/licenses/by/4.0 |
| dc.subject | Multi-Site Analysis |
| dc.subject | Exploratory Analysis |
| dc.subject | Cross-Sectional Analysis |
| dc.subject | Person-Level Analysis |
| dc.subject | Visit-Level Analysis |
| dc.title | Patient-Facts: Multi-Site, Exploratory, Cross-Sectional Analysis |
| dspace.entity.type | DQCheck |
| local.code.package | # install.packages("devtools") devtools::install_github('ssdqa/https://github.com/ssdqa/patientfacts') |
| local.description.raw | The raw data output of this check produces ten columns of data: <br> | Column | Data Type | Definition | |-----------------------|-----------|----------------------------------------------------------------------------------------------------------------------------------| |`study` | character | a user provided string label for the study | |`site` | character | the name of the site being targeted | |`visit_type` | character | string indicating the visit type | |`domain` | character | string indicating the domain | |`median_all_with0s` | numeric | overall median facts per year of follow up across the cohort, including patients that do not have evidence of the domain | |`median_all_without0s` | numeric | overall median facts per year of follow up across the cohort, excluding patients that do not have evidence of the domain | |`n_tot` | numeric | total number of patients in the cohort | |`n_w_fact` | numeric | number of patients in the cohort with a fact in the domain of interest | |`median_site_with0s` | numeric |`site`-specific median facts per year of follow up across the cohort, including patients that do not have evidence of the domain | |`median_site_without0s` | numeric |`site`-specific median facts per year of follow up across the cohort, excluding patients that do not have evidence of the domain | {.dqcheck-table} |
| local.description.viz | This check outputs a dot plot showing the median number of facts per patient for each site (domain along the y-axis with the median fact count along the x-axis). Each dot indicates a site value, while the star icon represents the overall median. Hovering over the graph provides values for each data point including the site name and the total number of observed patients with a fact. |
| local.dqcheck.category | Completeness |
| local.dqcheck.clinicalprobe | Clinical Follow-Up |
| local.dqcheck.clinicalprobe | Utilization Patterns |
| local.dqcheck.measurement | Time Series Exploration |
| local.dqcheck.probe | Information Density |
| local.dqcheck.probe | External Benchmarking |
| local.dqcheck.probe | Missing Expected Data |
| local.dqcheck.requirement | cohort |
| local.dqcheck.requirement | study_name |
| local.dqcheck.requirement | patient_level_tbl |
| local.dqcheck.requirement | visit_types |
| local.dqcheck.requirement | omop_or_pcornet |
| local.dqcheck.requirement | multi_or_single_site |
| local.dqcheck.requirement | time |
| local.dqcheck.requirement | time_span |
| local.dqcheck.requirement | time_period |
| local.dqcheck.requirement | p_value |
| local.dqcheck.requirement | age_groups |
| local.dqcheck.requirement | anomaly_or_exploratory |
| local.dqcheck.requirement | domain_tbl |
| local.dqcheck.requirement | visit_type_table |
| local.dqcheck.type | Cohort Fitness |
| local.dqcheck.viz | Line Graph |
| relation.isCodeOfDQCheck | 929c8dfc-2c8b-4e62-8e1d-0fa06c542832 |
| relation.isCodeOfDQCheck.latestForDiscovery | 929c8dfc-2c8b-4e62-8e1d-0fa06c542832 |
| relation.isDQResultOfDQCheck | 8c8f0890-31a3-4e28-9bd7-c4c3ffe575f4 |
| relation.isDQResultOfDQCheck | 7d0e1051-3ac1-4fe4-b9b4-a3502e40c96d |
| relation.isDQResultOfDQCheck | 1cfb5127-55eb-4531-bf73-68c0c6f37dc8 |
| relation.isDQResultOfDQCheck.latestForDiscovery | 8c8f0890-31a3-4e28-9bd7-c4c3ffe575f4 |
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