Kidney Transplant
dc.contributor.author | Nguyen, Nhat |
dc.contributor.author | Hirabayashi, Katie |
dc.contributor.other | Children's Hospital of Philadelphia |
dc.contributor.other | PEDSnet Data Coordinating Center |
dc.date.accessioned | 2025-03-12T15:48:51Z |
dc.date.created | 2025-03 |
dc.description | The computable phenotype was developed to query patients who had undergone kidney transplant and was validated against USRDS dataset and a subset of chart review patients. The most optimal algorithm for identifying children with kidney transplant used one code from Group A (more specific) and two distinct codes from Group B (more sensitive), achieving the following performance metrics: <br> <br> - **F1 Score:** 0.93 (95% CI 0.89-0.97)<br> - **PPV:** 90.7% (95% CI 84.2%-95.8%)<br> - **Sensitivity:** 96.0% (95% CI 91.8%-100.0%) |
dc.description.abstract | A phenotype to identify patients with chronic kidney dialysis based on a combination of broad and chronic dialysis procedure and condition codes, and eGFR values. Downloadable content for this Phenotype includes two R files (cohorts.R and driver.R) and a specs folder, which includes the required concept sets. |
dc.identifier.uri | https://pedsnet.org/metadata/handle/20.500.14642/980 |
dc.provenance | This phenotype was developed for the Preserving Kidney Function in Children with Chronic Kidney Disease (PRESERVE) study. |
dc.publisher | PEDSnet |
dc.relation | Kidney Transplant |
dc.relation.uri | https://github.com/PRESERVE-Coordinating-Center/PRESERVE_Variables/blob/main/analytic_code/kidney_transplant_cp_USRDS.R |
dc.rights | a CC-BY Attribution 4.0 license. |
dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ |
dc.subject | Computable Phenotyping::Content Data Model::PCORnet Data Model |
dc.subject | Computable Phenotyping::Phenotype Evaluation::Validated |
dc.subject | Computable Phenotyping::Phenotype Development Strategy::Rules-Based (Structured Data-Only) |
dc.subject.mesh | Kidney Transplantation |
dc.subject.mesh | Renal Replacement Therapy |
dc.subject.mesh | Organ Transplantation |
dc.subject.mesh | Urologic Surgical Procedures |
dc.subject.other | ICD-10-PCS |
dc.subject.other | SNOMED |
dc.subject.other | ICD-10-GM |
dc.subject.other | CPT |
dc.subject.other | ICD-10-CM |
dc.subject.other | ICD-9-CM |
dc.title | Kidney Transplant |
dspace.entity.type | Phenotype |
local.quality.status | Research-Ready |
local.subject.flat | PCORnet Data Model |
local.subject.flat | Validated |
local.subject.flat | Rules-Based (Structured Data-Only) |
local.subject.flat | Any Age Patient Population |
local.subject.flat | Any Gender Identity Patient Population |
local.subject.flat | Any Race/Ethnicity Patient Population |
relation.isConceptSetOfPhenotype | 09c2d231-d02b-4c7f-a68f-c8edf2bae282 |
relation.isConceptSetOfPhenotype.latestForDiscovery | 09c2d231-d02b-4c7f-a68f-c8edf2bae282 |
relation.isStudyOfPhenotype | 6df51ca1-7a01-4551-b1f1-ca70aaf2c5ae |
relation.isStudyOfPhenotype.latestForDiscovery | 6df51ca1-7a01-4551-b1f1-ca70aaf2c5ae |
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